搜索到844篇“ COFACTORS“的相关文章
Molecular Basis of KAT2A Selecting Acyl-CoA Cofactors for Histone Modifications
2024年
Emerging discoveries about undocumented acyltransferase activities of known histone acetyltransferases(HATs)advance our understandings in the regulation of histone modifications.However,the molecular basis of HATs selecting acyl coenzyme A(acyl-CoA)substrates for histone modification is less known.We here report that lysine acetyltransferase 2A(KAT2A)as an illustrative instance of HATs can selectively utilize acetyl-CoA,propionyl-CoA,butyryl-CoA,and succinyl-CoA to directly deposit 18 histone acylation hallmarks in nucleosome.By analyzing the co-crystal structures of the catalytic domain of KAT2A in complex with acetyl-CoA,propionyl-CoA,butyryl-CoA,malonyl-CoA,succinyl-CoA,and glutaryl-CoA,we conclude that the alternative substrate-binding pocket of KAT2A and the length and electrostatic features of the acyl chain cooperatively determine the selection of the acyl-CoA substrates by KAT2A.This study reveals the molecular basis underlying the pluripotency of HATs that selectively install acylation hallmarks in nucleosomes,which might serve as instrumental mechanism to precisely regulate histone acylation profiles in cells.
Sha LiNan LiJie HeRunxin ZhouZhimin LuYizhi Jane TaoYusong R.GuoYugang Wang
关键词:ELECTROSTATIC
非天然氧化还原辅酶赋能生物制造
2024年
生物制造以生物体机能进行大规模化学品加工与合成。这种生产方式相较于传统的化学制造,具有更低的能耗、更少的废物排放和更高的产品附加值,是一种绿色、可持续的生产方式。构建微生物细胞工厂是生物制造的具体实现形式之一。然而,微生物细胞工厂常因胞内辅酶层次的串扰而未能呈现出预期功能。简要介绍调控胞内氧化还原辅酶水平的常规方法及其局限,说明创制非天然辅酶介导系统的必要性。此外,重点以烟酰胺胞嘧啶二核苷酸和烟酰胺单核苷酸为例,介绍如何研制新型生物学元件、氧化还原模块进而设计新的微生物细胞工厂。最后,预测了基于非天然辅酶的生物制造未来发展方向,并分析了所面临的挑战。
王雪颖周雍进赵宗保
关键词:生物催化合成生物学
Molecular Basis of KAT2A Selecting Acyl-CoA Cofactors for Histone Modifications
2023年
Emerging discoveries about undocumented acyltransferase activities of known histone acetyltransferases(HATs)advance our understandings in the regulation of histone modifications.However,the molecular basis of HATs selecting acyl coenzyme A(acyl-CoA)substrates for histone modification is less known.We here report that lysine acetyltransferase 2A(KAT2A)as an illustrative instance of HATs can selectively utilize acetyl-CoA,propionyl-CoA,butyryl-CoA,and succinyl-CoA to directly deposit 18 histone acylation hallmarks in nucleosome.By analyzing the co-crystal structures of the catalytic domain of KAT2A in complex with acetyl-CoA,propionyl-CoA,butyryl-CoA,malonyl-CoA,succinyl-CoA,and glutaryl-CoA,we conclude that the alternative substrate-binding pocket of KAT2A and the length and electrostatic features of the acyl chain cooperatively determine the selection of the acyl-CoA substrates by KAT2A.This study reveals the molecular basis underlying the pluripotency of HATs that selectively install acylation hallmarks in nucleosomes,which might serve as instrumental mechanism to precisely regulate histone acylation profiles in cells.
Sha LiNan LiJie HeRunxin ZhouZhimin LuYizhi Jane TaoYusong R.GuoYugang Wang
关键词:ELECTROSTATIC
辅因子在微生物细胞工厂中的代谢调控与应用
2022年
生物体中大部分酶催化反应都需要辅因子参与,辅因子平衡对维持正常的细胞代谢至关重要,而辅因子失衡则会导致细胞生长和生产的紊乱。在微生物细胞工厂的构建中,通过调节辅因子代谢平衡来提高产物合成途径的效率,从而调控细胞生长与产物生产,使代谢流能够最大限度地流向目标产物,已经成为代谢调控的重要手段。目前常见的用于代谢调控的辅因子有NAD(P)H/NAD(P)^(+)、辅酶、ATP/ADP等。围绕这几种辅因子的代谢途径及功能分类进行了综述,并总结了微生物中不同产物利用辅因子平衡策略进行合成调控的研究,以期为各类化合物的高效生物合成提供参考。
贾男臧国伟李春李春
关键词:代谢工程生物制造
辅因子与发酵调控谷氨酸棒状杆菌合成丁二酸
2022年
丁二酸是一种重要的平台化合物,它的产量直接影响着许多衍生产品的发展趋势。以重组谷氨酸棒状杆菌SA001/pXMJ19-cysQ为出发菌,通过提高代谢过程中辅酶NADH含量,增加由乙醛酸循环途径到丁二酸的代谢流,考察丁二酸产量及产率的变化。发现该菌经0.8mmol/L的IPTG有氧诱导8h后,重组菌NADP(H)磷酸酶的酶活比,相较于对照菌酶活提高了3.1倍,并在厌氧发酵过程中仍然保持一定活性。转入厌氧发酵8h,重组菌厌氧阶段8h内丁二酸的产量达到11.9g/L,相较于对照菌,产物的得率增加了31.3%,同时副产物乙酸的量降低了6.97%,丁二酸与乙酸的摩尔比值提高了35.2%。这表明提高NADPH磷酸酶辅因子可以增加由乙醛酸途径流向丁二酸的代谢流。
沙凤孙科谭芳美熊美惠
关键词:谷氨酸棒杆菌丁二酸
Interplay between cofactors and transcription factors in hematopoiesis and hematological malignancies被引量:3
2021年
Hematopoiesis requires finely tuned regulation of gene expression at each stage of development.The regulation of gene transcription involves not only individual transcription factors(TFs)but also transcription complexes(TCs)composed of transcription factor(s)and multisubunit cofactors.In their normal compositions,TCs orchestrate lineage-specific patterns of gene expression and ensure the production of the correct proportions of individual cell lineages during hematopoiesis.The integration of posttranslational and conformational modifcations in the chromatin landscape,nucleosomes,histones and interacting components via the cofactor-TF interplay is critical to optimal TF activity.Mutations or translocations of cofactor genes are expected to alter cofactor-TF interactions,which may be causative for the pathogenesis of various hematologic disorders.Blocking TF oncogenic activity in hematologic disorders through targeting cofactors in aberrant complexes has been an exciting therapeutic strategy.In this review,we summarize the current knowledge regarding the models and functions of cofactor-TF interplay in physiological hematopoiesis and highlight their implications in the etiology of hematological malignancies.This review presents a deep insight into the physiological and pathological implications of transcription machinery in the blood system.
Zi WangPan WangYanan LiHongling PengYu ZhuNarla MohandasJing Liu
关键词:HEMATOPOIESISCOFACTORLANDSCAPE
手性NAD类似物合成及其辅酶应用被引量:1
2021年
烟酰胺腺嘌呤二核苷酸(NAD)是生命体中必不可少的氧化还原辅因子。NAD具有β-NAD和α-NAD两种差向异构体,而大多数NAD依赖酶偏好β-NAD。近年来,已合成大量结构简化的NAD类似物,并探索其作为氧化还原辅因子应用于生物催化反应。通常认为酶天然具有立体选择性,而很多结构简化的NAD类似物不含手性中心,暗示有必要合成手性NAD类似物以评估其性能。本研究拟设计合成手性NAD类似物,并初步探讨部分氧化还原酶利用它们作为辅酶的催化性能。以商品化光学纯的氨基-3-苯基丙酸为手性原料,合成了两对NAD类似物对映体,并用来源于巨芽孢杆菌的突变型细胞色素P450单加氧酶(P450 BM3 R966D/W1046S)和来源于硫化叶菌的突变型葡萄糖脱氢酶(SsGDH I192T/V306I),测试这些NAD类似物作为辅酶的催化活性。结果发现,P450 BM3 R966D/W1046S利用还原型S构型NAD类似物的催化效率高于对应的R构型NAD类似物;而SsGDH I192T/V306I则对NAD类似物对映体均没有活性。研究初步表明,氨基酸可作为手性原料制备立体构型明确的NAD类似物,而氧化还原酶表现出偏好特定手性NAD类似物的现象,也提示需要合成更多的手性NAD类似物,并系统测试和匹配氧化还原酶及其突变体,以创建出基于辅酶依赖型氧化还原酶的新催化体系。
李青刘武军刘武军王倩王倩
关键词:生物催化辅酶立体化学氧化还原酶
内质网应激相关分子伴侣Bip及辅助伴侣ERdjs被引量:4
2020年
内质网应激影响各类分子伴侣及其辅助伴侣的表达。那么,通过调节内质网应激相关分子伴侣和辅助伴侣,是否能减少异常折叠蛋白并恢复内质网稳态?本文主要探讨了内质网应激过程中,辅助伴侣ERdjs结合未折叠或错误折叠蛋白,与分子伴侣Bip相互作用后,在调节内质网质量控制中的具体调节机制的相关理论研究进展。
邬珊珊廉姜芳
关键词:内质网应激热休克蛋白BIP
结核分枝杆菌TetR家族蛋白Rv3295新调控靶点及辅助因子的初步研究被引量:2
2020年
为了验证rv3229c是否为结核分枝杆菌(MTB)的转录调控蛋白Rv3295的调控靶点,并研究哪些小分子对rv3229c与Rv3295蛋白的结合有影响,本研究通过PCR扩增MTB rv3295基因后构建了重组表达载体pET-22b-rv3295,经诱导后得到重组蛋白Rv3295。凝胶迁移试验(EMSA)和染色质免疫沉淀(ChIP)试验结果显示,Rv3295与rv3229c(desA3)启动子在体外与体内均能够结合。DNA大沟小沟结合试验表明,Rv3295与rv3229c DNA的大沟结合。通过EMSA小分子筛选,结果显示,小分子(VB1、VB3、VB6、VC)和金属离子(Fe3+和Zn2+)在体外均可降低Rv3295与rv3229c启动子区域的结合,而氨基酸及其它小分子对该结合无影响。分子对接试验表明Rv3295的Glu 67和Glu 105氨基酸残基在该蛋白质与小分子及金属离子的相互作用中起重要作用。以上试验结果表明rv3229c为TetR家族蛋白Rv3295新的调控靶点。本研究首次揭示了MTB中的Rv3295调控蛋白可直接调控rv3229c(desA3)的表达,进而参与油酸合成的调控。
吕明月崔莹莹唐祎依党光辉崔子寅刘思国宋宁宁
关键词:结核分枝杆菌转录调控
Study of Cofactors Associated with Precancerous High-Grade Cervical Lesions at the Teaching Hospital Gabriel Touré, 2010 to 2015
2019年
Introduction: High grade dysplasia of the cervix has a high incidence and can progress to cervical cancer. The aim was to study cofactors associated with high-grade cervical dysplasia. Methodology: This was a retrospective case-control study without matching. Women with high grade dysplasia were the cases while those with a normal screening test represented the controls. The study took place at the Gabriel Touré University Hospital Center in Bamako. We included 351 cases and 420 controls. The capture and analysis were performed using the SPSS 20 software. A univariate and multivariate logistic regression analysis was performed for the analysis of risk cofactors. The statistical tests used were the odds ratio and its confidence interval and the statistical significance threshold was set at p Results: In univariate analysis, the co-factors statistically significantly associated with the occurrence of high-grade dysplasia were parity 0.6 (0.5 - 0.9), gestational 0.7 (0.5 - 0.9), smoking of the spouse 3.4 (1.1 - 11.3), the non-schooling 1.4 (1.2 - 2.1). In multivariate analysis after adjusting for confounding factors, two co-factors have significantly increased the risk of high-grade dysplasia: lack of schooling 1.4 (1.2 - 2.0) and polygamy 1.5 (1.4 - 2.5). Conclusion: At the end of this study, polygamy and lack of schooling were the main risk factors. The prevention of cervical cancer will go through the education of girls and women as well as communication for behavioral change and social change.
Fané SeydouBocoum AmadouSissoko AbdoulayeTraoré Soumana OumarSanogo Siaka AmaraMamadou SimaKouma AminataTraoré AlassaneTegueté IbrahimaTraoré YoussoufMounkoro Niani
关键词:COFACTORGABRIEL

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陈虎
作品数:15被引量:33H指数:2
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焦士会
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